Gene Sets and Pathway Gene Sets
Gene Sets and Pathway Gene Sets
We have compiled a selection of gene sets and pathway-related gene sets for research reference and convenience.
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1. Gene Family Sets
P450-Related Gene Set
Transcription Factor Gene Set
Induced Pluripotent Stem Cell (iPSC)-Related Gene Set
Druggable Genome Gene Set
Pluripotency Stem Cell Gene Set
Embryonic Stem Cell Gene Set
Embryonic Stem Cell Differentiation and iPSC-Related Gene Set
Phosphatase Gene Set
Ion Channels: ATP Receptor Gene Set
Ion Channels: Transient Receptor Potential (TRP) Gene Set
Ion Channels: Other Gene Set
Ion Channels: Sodium Gene Set
Ion Channels: Potassium Gene Set
Ion Channels: Cyclic Nucleotide-Gated Gene Set
Ion Channels: Glutamate Receptor Gene Set
Ion Channels: Calcium Gene Set
Ion Channels: Cys-Loop Receptor Gene Set
Transmembrane Protein Gene Set
GPCR Gene Set
Nuclear Hormone Receptor Gene Set
Stem Cell-Related Signaling: DSL-Notch Pathway Gene Set
Stem Cell-Related Signaling: TGF-β/BMP Signaling Pathway Gene Set
Stem Cell-Related Signaling: JAK-STAT Signaling Pathway Gene Set
Stem Cell-Related Signaling: Wnt Signaling Pathway Gene Set
Secreted Protein Gene Set
Protease Gene Set
Protein Kinase Gene Set
Adult Stem Cell Gene Set
Cancer Stem Cell Gene Set
2. Pathway Gene Sets
Cancer Drug Resistance and Metabolism Gene Set
Cancer PathwayFinder Gene Set
Cancer PathwayFinder Gene Set
Interleukin and Interleukin Receptor Gene Set
Alanine and Aspartate Metabolism — KEGG Gene Set
Classical Complement Activation Gene Set
Osteoblast Gene Set
Osteogenesis Gene Set
Hedgehog — NetPath 10 Gene Set
Metabolic and Obesity Gene Set
Monoamine GPCR Gene Set
Cholesterol Biosynthesis Gene Set
Proteasome Degradation Gene Set
Hypoxia Signaling Pathway Gene Set
Electron Transport Chain Gene Set
Apoptosis and Cell Cycle Gene Set
Translation Factor Gene Set
Hepatocyte Growth Factor Receptor Signaling — BioCarta Gene Set
Stem Cell Gene Set
Glutathione Metabolism — KEGG Gene Set
Nucleotide Metabolism Gene Set
Nucleotide GPCR Gene Set
Nuclear Receptor Gene Set
Nuclear Receptors in Lipid Metabolism and Toxicity Gene Set
Ribosomal Protein Gene Set
Striated Muscle Contraction Gene Set
Eicosanoid Synthesis Gene Set
Regulation of Actin Cytoskeleton — KEGG Gene Set
Matrix Metalloproteinase Gene Set
Krebs–TCA Cycle Gene Set
Steroid Biosynthesis Gene Set
Ovarian Infertility Gene Set
Immunology Gene Set
Endothelial Cell Biology Gene Set
Urea Cycle and Metabolism of Amino Groups — KEGG Gene Set
Blood Clotting Cascade Gene Set
Smooth Muscle Contraction Gene Set
Osteoclast Gene Set
Common Cytokine Gene Set
Prostaglandin Synthesis Regulation Gene Set
Chemokine and Receptor Gene Set
Chemokine Gene Set
Notch Gene Set
Breast Cancer and Estrogen Receptor Signaling Gene Set
Breast Cancer Gene Set
Endochondral Ossification Gene Set
Triacylglycerol Synthesis — BiGCaT Gene Set
Tryptophan Metabolism — KEGG Gene Set
Neuroscience: Ion Channels and Transporters Gene Set
Neurotrophin and Receptor Gene Set
Biogenic Amine Synthesis Gene Set
KIT Receptor — NetPath 6 Gene Set
Statin Pathway — PharmGKB Gene Set
Peptide GPCR Gene Set
Glycolysis and Gluconeogenesis Gene Set
Glucocorticoid Signaling Gene Set
Glucocorticoid and Mineralocorticoid Metabolism Gene Set
Glycogen Metabolism Gene Set
Synthesis and Degradation of Ketone Bodies — KEGG Gene Set
Pentose Phosphate Pathway Gene Set
Selenoprotein Gene Set
Selenium Gene Set
Apoptosis Gene Set (1)
Apoptosis Gene Set (2)
Apoptosis Gene Set
Cytokine Gene Set
Cell Cycle Gene Set (1)
Cell Cycle Gene Set
Cell Cycle: G1-to-S Control — Reactome Gene Set
Cell Cycle — KEGG Gene Set
Mitochondrial Gene Expression Gene Set
Mitochondrial Fatty Acid β-Oxidation Gene Set
Asthma Gene Set
Small-Ligand GPCR Gene Set
Cardiovascular Disease: Atherosclerosis Gene Set
Cardiovascular Disease: Biomarkers Gene Set
Cardiovascular Disease Gene Set
Calcium Regulation in Cardiac Cells Gene Set
Androgen Receptor — NetPath 2 Gene Set
Androgen Signaling and Prostate Cancer Gene Set
Angiogenesis Gene Set (1)
Angiogenesis Gene Set
Heme Biosynthesis Gene Set
Inflammatory Cytokine/Receptor Gene Set
Inflammatory Response Pathway Gene Set
Oxidative Stress Gene Set
Folate Network Gene Set
One-Carbon Metabolism Gene Set
Insulin Signaling Gene Set
Insulin Signaling Pathway Gene Set
Acetylcholine Synthesis Gene Set
Adhesion and Extracellular Matrix Molecule Gene Set
Integrin-Mediated Cell Adhesion — KEGG Gene Set
Adipogenesis Gene Set
Fatty Acid Synthesis — BiGCaT Gene Set
Fatty Acid β-Oxidation — BiGCaT Gene Set
Fatty Acid ω-Oxidation — BiGCaT Gene Set
Tumor Metastasis Gene Set
Circadian Exercise Gene Set
Autoimmune and Inflammatory Response Gene Set
ACE Inhibitor Pathway — PharmGKB Gene Set
Alpha6-Beta4 Integrin — NetPath 1 Gene Set
B Cell Receptor — NetPath 12 Gene Set
cAMP and Ca²⁺ Signaling Pathway Gene Set
cAMP and Ca²⁺ Signaling Pathway Gene Set
DNA Replication — Reactome Gene Set
EGF/PDGF Signaling Pathway Gene Set
EGFR1 — NetPath 4 Gene Set
G13 Signaling Pathway Gene Set
G Protein-Coupled Receptor Signaling Pathway Gene Set
G Protein Signaling Gene Set
GPCRDB Class B: Secretin-Like Gene Set
GPCRDB Class C: Metabotropic Glutamate and Pheromone Receptor Gene Set
GPCRDB Class A: Rhodopsin-Like Gene Set
GPCRDB: Other Gene Set
HSP70 and Apoptosis Gene Set
Fas Pathway and Stress-Induced HSP Regulation — BioCarta Gene Set
Hypertrophy Model Gene Set
ID — NetPath 5 Gene Set
IL-2 — NetPath 14 Gene Set
IL-3 — NetPath 15 Gene Set
IL-4 — NetPath 16 Gene Set
IL-5 — NetPath 17 Gene Set
Note: The original source material provided for this article ends at item 123. The remaining pathway gene sets can be added to this list once the complete source list is available.
